BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F10SP1|AL430095
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1737 1861 0.0
>3x_Contig1737
Length = 17214
Score = 1861 bits (937), Expect = 0.0
Identities = 940/943 (99%)
Strand = Plus / Minus
Query: 1 actgttcaattccagtaattcaatagatcgtccagtaattcagcagaccgtccagttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5104 actgttcaattccagtaattcaatagatcgtccagtaattcagcagaccgtccagttttc 5045
Query: 61 tatcgggttgtgttactcgaagcgtattttcaacgttgcaaccaacagtgataaaagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5044 tatcgggttgtgttactcgaagcgtattttcaacgttgcaaccaacagtgataaaagact 4985
Query: 121 tttccgataaggtcaacagaacttgagcttttctgtctagcataggccatggttccatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4984 tttccgataaggtcaacagaacttgagcttttctgtctagcataggccatggttccatcg 4925
Query: 181 cgataaaggaaaattagtcatcgttgatcgtctggtataagamggtttgccttttgtata 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4924 cgataaaggaaaattagtcatcgttgatcgtctggtataagaaggtttgccttttgtata 4865
Query: 241 tcattcttggtagtatccggtagttctcagatagttctcagatagttcattgaacctgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4864 tcattcttggtagtatccggtagttctcagatagttctcagatagttcattgaacctgga 4805
Query: 301 gaagaagagcttgattcatcgagccattctcgcaaagtatgtacataccaagtcatttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4804 gaagaagagcttgattcatcgagccattctcgcaaagtatgtacataccaagtcatttag 4745
Query: 361 aggttactgatttagacaagcaggtcagcgtcataaaacaatacccgttgggkgtattgt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4744 aggttactgatttagacaagcaggtcagcgtcataaaacaatacccgttgggtgtattgt 4685
Query: 421 tcaattacaattccgcaaagacgggtttattggactatttcaagtctggtaagccacctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4684 tcaattacaattccgcaaagacgggtttattggactatttcaagtctggtaagccacctt 4625
Query: 481 cgggaaccgaccgtgtggattctgtcatgtgtgcyactcatgtgccattccattacgtag 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4624 cgggaaccgaccgtgtggattctgtcatgtgtgctactcatgtgccattccattacgtag 4565
Query: 541 aggatccggagggcaagaccaagggtaaattgatcgcccatttggctgggcagaaccagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4564 aggatccggagggcaagaccaagggtaaattgatcgcccatttggctgggcagaaccagc 4505
Query: 601 atattgccatgcttgaagagaacgctaactgcttagtggttttccagagtgtggactcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 atattgccatgcttgaagagaacgctaactgcttagtggttttccagagtgtggactcgt 4445
Query: 661 atgtgtctccggaatggtatccgttgaagaagaagacgcataagttcgttccgacctggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 atgtgtctccggaatggtatccgttgaagaagaagacgcataagttcgttccgacctggg 4385
Query: 721 attttgcgtgcgttcacgtttacggtagggccaagatcattcatgatgacgaggaatggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384 attttgcgtgcgttcacgtttacggtagggccaagatcattcatgatgacgaggaatggt 4325
Query: 781 tgctgggtatgttgaattcgatcacagaccaagaggaaaagaaacgtccagatacgacga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4324 tgctgggtatgttgaattcgatcacagaccaagaggaaaagaaacgtccagatacgacga 4265
Query: 841 ctgtttccgagaaagatgaagatcactccggtgagaaaggcgaggtcccgatccaccgct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4264 ctgtttccgagaaagatgaagatcactccggtgagaaaggcgaggtcccgatccaccgct 4205
Query: 901 ggaaagtggaagaagctgagaagaggtacttgagccaggcgat 943
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4204 ggaaagtggaagaagctgagaagaggtacttgagccaggcgat 4162
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6207
Number of Sequences: 1807
Number of extensions: 6207
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)